8UBE Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_8UBE_001 | 1/I/17:22 | No text annotation | geometric HL_1WZ2_007 HL_75660.10 | |
| HL_8UBE_003 | 1/I/113:121 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_8UBE_002 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_8UBE_003 | 1/I/6:8, 1/I/30:31 | No text annotation | ||
| IL_8UBE_004 | 1/I/14:16, 1/I/23:24 | Minor groove platform | geometric IL_1U6B_007 IL_41261.1 | |
| IL_8UBE_006 | 1/I/99:104, 1/I/129:132 | No text annotation | ||
| IL_8UBE_007 | 1/I/107:113, 1/I/121:126 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_5J7L_251 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_8UBE_001 | No text annotation | ||
| IL_8UBE_002 | Triple non-canonical cWW pairs | ||
| IL_8UBE_005 | Single bulged U |
Valid loops
No loops found
Problematic loops
No problematic loops
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